Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923011.1_cds_XP_016471725.1_64029
CDS Infomation

[gene=LOC107793801] [db_xref=GeneID:107793801] [protein=pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like] [protein_id=XP_016471725.1] [location=complement(11488..14280)] [gbkey=CDS]
Sequence

ATGGAGGCTGCTACTCCATTGTACCACTTCATTTCTTCACATCAGCCACTCACCCAAAAG
CAACCCAGAAGATATTCCACAAATTTTGGCCTTATAAATGTAGCAGAAACACTTCCTGAA
ACTTCACCCTCAACCTCACCTTCTCCACTTTCTTCATTGCAATTTGATTATGAAAAAGAG
TTCCATTCACTAAACTCAGTCAGAGCAATGCATGCCAAGATGATAAAATTGTCTAGTGTA
TGGGATTCAAAGAGAAATATGCAGTCTTTTATCTCAGCTTACTTGGAATTTGGTGATTTT
CAATCAGCTGCAGTGTTATTCTTTGTGGGGTTTGCAGAGAACTATTTGTATTGGAATTCT
TTCCTTGAAGAATTTAGTTATTTTGGTGGAAACCCATGTGAAATTCTTGAAGTTTTCAGT
GGGTTACATAGTAAAGGAGTGAACTTTAACGCTGAAATTCTAGCTTTTGTCTTGAAAATC
TGTTCAAAGTTAAGAGACAAGTGGCTAGGATTGGAAATCCATGCTTGTTTGATCAAGAAA
GGTTTTAATTTAGATGTCTATACACAATGTGCACTGATGAATTTTTATGGGAGGTGTTGT
GGGACAGAGAGTGCTAATAAGGTTTTTAAAGATACATCAATCCGTGACTCTTTATTGTGG
AATGAAGCAATTTTGGTTAATTTAAGGAATGAGAAATGGGCTGAAGGTCTACAAATGTTT
CATGAAATGCAGACATTACATGTTAAGGCCAATAGCCTAACCATTTCCAAAGTTTTGCAA
GCATGTGGGAAATTGGGTGCTCTTGATGAAGGAAAACAGATTCACGGGTATGTTATCCGA
TATGCCTTAGAATCGAATATAATGATACGCACTGCACTCAGCAACATGTATGTAAAAAAT
GACAATCTCAAACTTGCTAGAGTAGTTTTTGATTCAACAGACAATCGTAATCTGCCTTGT
TGGAACAGTATTATTTCGGGGTATATTGCACTTGGTTACCTTGATGACGCATGGGAGCTA
TTTAATGAAATGATAACTTCCAACATAAAACCGGACATAATAACCTGGAACTGCCTTTTA
TCTGGTCATTTTCTTCATGGATCATATCCAGAGGTTTTGGCGATTCTGAGGAGAATGCAG
AGTGCTGGTTATCATCCAAATCGCAACTCTATAACCAGTGTTCTTCAGGCAGTGACTGAA
TTAGGCTATTTGAATAGTGGTAAGGAGATCCATTGCCATGTTATAAGAAATGGACTTGAC
TATGACCTGCATGTTGCAACTTCACTAGTAGATATGTATGTGAAGAATGATGATTTGACA
TCTGCTCAAGCTGTTTTCGATTGTATGACAAACAGAAATATTTGTGCTTGGAATTCATTA
ATTTCTGGTTATTCCTGCAAGGGACATTTTGAAAAAGCTGGTAATCTTTTGAATCAGATG
AAGGAAGAAGGGATTAAACCAGATATAGTGACATACAATAGCATGGTTTCTGGTTATTCA
ACGTCTAGCTGCATTAAGGAAGCTTTGGGTATGATTCGAAGGATCAAAAGTTGTGGCATG
TCTCCTAATGTCATTTCATGGACCTCTTTAATATCAGGTTGTTCACAGCAAGGATATTTT
AGAGAAGCATTTGAGTTTTTAATTCAGATGCAGGATGAAGGTATCAAAGTCAACTCAGTT
ACAATTTCAAGCTTACTTCAAGCATGTGCAGGTCTCTCTTTGTTACATATTGGGAAAGAG
ATACACTGCTTGTGTATACGAAACGATTTTATAGATGATGTGTATGTATCTACGGCTCTC
ATAGACATGTACAGTAAGTGTGGGAACTTAGAAAATGCTCAGAAGGTTTTCCAAAGACTT
GAGGACAAAACAATAGCTTCCTGGAATTCCATGATCACCGGTTTTGCCATATACGGCCTT
AGTACAGAGGCAATTTCAGTCTTTGATAGAATGAGAGGAGCAAACATCCAACCAGATGCC
ATAACATTCATAGCTCTTCTATCTAGTTGTAAACATTATGGTTTGCTCGATAAAGGTTGG
AAATATTTTGATCATATGAAGACAGATTTTGGAGTTACCCCCACAATTGAGCATTACTCT
TGCATGGTTGATCTACTGGGAAGAGCTGGTTACCTTGATGAAGCATTGGATTTTATTCAG
TCAATGCCGATGGAGCCAAATGCTGCTGTTTGGGGTGCTCTTCTTACATCATGTCGGATC
CATGGAAACGTGGAGCTTGGAGAGATTGCAGCAGAATACCTTTTCAAGTTAGAACCATAT
AATGCAGCTAACTATGCCTTAATGATGAACCTCTATGCACTTTCAAACCGATGGAAGGAT
GTTGACCGTATCAGAGACAAGATGGAAGCAATGGGAGTGAAAATCGGACCTGTATGGAGT
TGGGTACAAGTCAATCAGAGGATTCACATCTTCTCTACAGCAGGAAAAACTCATCAAGAA
GGAGAGATATACTTTGAACTGTACAAGTTAATATCTGAGATGAAGAAGTTGGGCTATGCA
CCTGATACTAAATGTGTTTGTCAGAACATTCCTGAAGTGGAGAAAGAAAAGGTGCTACTT
GCTCACACTGAAAAACTGGCAATTACATATGGATTAATCAGGACCACAAGTCCTGCACCT
ATTAGAGTGATCAATAATACAAGAATATGTTCAGACTGTCATACAGTTGCAAAATACATG
TCATTGCTGAGGAGGCGAGAGATTTTCCTAAAAGATGGTGTTCGCTTTCACCACTTTAAG
GATGGTAAATGTTCTTGCTGTGACTTCTGGTAG

Peptide Sequence

PEP ID

XP_016471725.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like [Nicotiana tabacum]
Sequence

MEAATPLYHFISSHQPLTQKQPRRYSTNFGLINVAETLPETSPSTSPSPLSSLQFDYEKE
FHSLNSVRAMHAKMIKLSSVWDSKRNMQSFISAYLEFGDFQSAAVLFFVGFAENYLYWNS
FLEEFSYFGGNPCEILEVFSGLHSKGVNFNAEILAFVLKICSKLRDKWLGLEIHACLIKK
GFNLDVYTQCALMNFYGRCCGTESANKVFKDTSIRDSLLWNEAILVNLRNEKWAEGLQMF
HEMQTLHVKANSLTISKVLQACGKLGALDEGKQIHGYVIRYALESNIMIRTALSNMYVKN
DNLKLARVVFDSTDNRNLPCWNSIISGYIALGYLDDAWELFNEMITSNIKPDIITWNCLL
SGHFLHGSYPEVLAILRRMQSAGYHPNRNSITSVLQAVTELGYLNSGKEIHCHVIRNGLD
YDLHVATSLVDMYVKNDDLTSAQAVFDCMTNRNICAWNSLISGYSCKGHFEKAGNLLNQM
KEEGIKPDIVTYNSMVSGYSTSSCIKEALGMIRRIKSCGMSPNVISWTSLISGCSQQGYF
REAFEFLIQMQDEGIKVNSVTISSLLQACAGLSLLHIGKEIHCLCIRNDFIDDVYVSTAL
IDMYSKCGNLENAQKVFQRLEDKTIASWNSMITGFAIYGLSTEAISVFDRMRGANIQPDA
ITFIALLSSCKHYGLLDKGWKYFDHMKTDFGVTPTIEHYSCMVDLLGRAGYLDEALDFIQ
SMPMEPNAAVWGALLTSCRIHGNVELGEIAAEYLFKLEPYNAANYALMMNLYALSNRWKD
VDRIRDKMEAMGVKIGPVWSWVQVNQRIHIFSTAGKTHQEGEIYFELYKLISEMKKLGYA
PDTKCVCQNIPEVEKEKVLLAHTEKLAITYGLIRTTSPAPIRVINNTRICSDCHTVAKYM
SLLRRREIFLKDGVRFHHFKDGKCSCCDFW

Transcript Sequence

Gene sequence data has not been registered.